{ "_id": "6a1d51981d7bb097a0a45e58", "Type": "Package", "Package": "effectclass", "Title": "Classification and Visualisation of Effects", "Version": "0.1.5", "Authors@R": "c(\nperson(\"Thierry\", \"Onkelinx\", , \"thierry.onkelinx@inbo.be\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-8804-4216\", affiliation = \"Research Institute for Nature and Forest (INBO)\")),\nperson(\"Research Institute for Nature and Forest (INBO)\", , , \"info@inbo.be\", role = c(\"cph\", \"fnd\"))\n)", "Description": "Classify effects by comparing the confidence intervals\nwith thresholds.", "License": "GPL-3", "URL": "https://inbo.github.io/effectclass/", "BugReports": "https://github.com/inbo/effectclass/issues", "VignetteBuilder": "knitr", "Config/checklist/communities": "inbo", "Config/checklist/keywords": "classification; effect size; uncertainty;\nvisualisation", "Encoding": "UTF-8", "Language": "en-GB", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.1", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev", "Repository": "https://inbo.r-universe.dev", "Date/Publication": "2024-06-04 08:19:42 UTC", "RemoteUrl": "https://github.com/inbo/effectclass", "RemoteRef": "HEAD", "RemoteSha": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-01 09:27:56 UTC", "User": "root" }, "Author": "Thierry Onkelinx [aut, cre] (ORCID:\n, affiliation: Research\nInstitute for Nature and Forest (INBO)),\nResearch Institute for Nature and Forest (INBO) [cph, fnd]", "Maintainer": "Thierry Onkelinx ", "MD5sum": "f64b8f72051ea6727ba81ce4bb89aa10", "_user": "inbo", "_type": "src", "_file": "effectclass_0.1.5.tar.gz", "_fileid": "3c63c1c738b6a3fe8dfb9043f7f3596daf9b1ad49ab426350d77755c8abe2c05", "_filesize": 1509345, "_sha256": "3c63c1c738b6a3fe8dfb9043f7f3596daf9b1ad49ab426350d77755c8abe2c05", "_created": "2026-06-01T09:27:56.000Z", "_published": "2026-06-01T09:32:08.681Z", "_distro": "noble", "_jobs": [ { "job": 78823667946, "time": 167, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7327984098" }, { "job": 78823667969, "time": 136, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7327974054" }, { "job": 78823667913, "time": 151, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7327979141" }, { "job": 78823667956, "time": 108, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7327964870" }, { "job": 78823014686, "time": 244, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7327929995" }, { "job": 78823667938, "time": 137, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7327974378" }, { "job": 78823668025, "time": 211, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7327998636" }, { "job": 78823667993, "time": 123, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7327969751" }, { "job": 78823668045, "time": 111, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7327966021" } ], "_buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/inbo/effectclass", "_commit": { "id": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "author": "Thierry Onkelinx ", "committer": "GitHub ", "message": "Merge pull request #17 from inbo/plotly\n\nPlotly", "time": 1717489182 }, "_maintainer": { "name": "Thierry Onkelinx", "email": "thierry.onkelinx@inbo.be", "login": "thierryo", "mastodon": "@ThierryO@fosstodon.org", "orcid": "0000-0001-8804-4216", "description": "", "uuid": 446636 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "assertthat", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "plotly", "role": "Imports" }, { "package": "crosstalk", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "inbo", "_selfowned": true, "_usedby": 2, "_updates": [], "_tags": [], "_topics": [ "effect-size", "fan-chart" ], "_stars": 5, "_contributors": [ { "user": "thierryo", "count": 155, "uuid": 446636 }, { "user": "hansvancalster", "count": 5, "uuid": 18713718 }, { "user": "florisvdh", "count": 2, "uuid": 19164640 }, { "user": "wlangera", "count": 1, "uuid": 60934857 } ], "_userbio": { "uuid": 2735610, "type": "organization", "name": "Research Institute for Nature and Forest (INBO)", "description": "Open source, data and science initiatives of the Research Institute for Nature and Forest (INBO)" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/effectclass" }, "_devurl": "https://github.com/inbo/effectclass", "_pkgdown": "https://inbo.github.io/effectclass/", "_searchresults": 51, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/effectclass.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "add_classification", "add_fan", "change_breaks", "change_labels", "class_labels", "classification", "coarse_classification", "format_ci", "is_effectclass", "reference_shape", "reference_text", "remove_sign", "scale_effect", "stat_effect", "stat_fan", "StatFan", "unlist" ], "_help": [ { "page": "add_classification", "title": "Add a point symbol with classification to a 'plotly' object", "concept": [ "plotly add-ons" ], "topics": [ "add_classification" ] }, { "page": "add_fan", "title": "Add a fan plot to a 'plotly' object", "concept": [ "plotly add-ons" ], "topics": [ "add_fan" ] }, { "page": "change_breaks", "title": "Logarithmic breaks for changes", "concept": [ "utils" ], "topics": [ "change_breaks" ] }, { "page": "change_labels", "title": "Display logarithmic changes as percentage", "concept": [ "utils" ], "topics": [ "change_labels" ] }, { "page": "class_labels", "title": "Return a standardised set of labels for the classification", "concept": [ "display functions" ], "topics": [ "class_labels" ] }, { "page": "classification", "title": "Classify Effects by Comparing the Confidence Intervals with a Reference and Thresholds", "concept": [ "classification functions" ], "topics": [ "classification" ] }, { "page": "coarse_classification", "title": "Use a Lower Scale Classification", "concept": [ "classification functions" ], "topics": [ "coarse_classification" ] }, { "page": "format_ci", "title": "Format an Estimate and Confidence Interval as Text", "concept": [ "display functions" ], "topics": [ "format_ci" ] }, { "page": "is_effectclass", "title": "Check If an Object Is a Valid Effectclass Object", "concept": [ "utils" ], "topics": [ "is_effectclass" ] }, { "page": "reference_shape", "title": "Create 'plotly'references Returns a list shapes you can pass to the 'shapes' argument of 'plotly::layout()'", "concept": [ "plotly add-ons" ], "topics": [ "reference_shape" ] }, { "page": "reference_text", "title": "Create 'plotly'reference text Returns a list text you can pass to the 'annotations' argument of 'plotly::layout()'", "concept": [ "plotly add-ons" ], "topics": [ "reference_text" ] }, { "page": "remove_sign", "title": "Remove the sign of a classification", "concept": [ "classification functions" ], "topics": [ "remove_sign" ] }, { "page": "scale_effect", "title": "A scale for effect points", "concept": [ "ggplot2 add-ons" ], "topics": [ "scale_effect" ] }, { "page": "stat_effect", "title": "Display points with classified effect", "concept": [ "ggplot2 add-ons" ], "topics": [ "stat_effect" ] }, { "page": "stat_fan", "title": "Display a fan plot", "concept": [ "ggplot2 add-ons" ], "topics": [ "StatFan", "stat_fan" ] }, { "page": "unlist", "title": "Flatten Lists", "concept": [ "utils" ], "topics": [ "unlist" ] } ], "_readme": "https://github.com/inbo/effectclass/raw/HEAD/README.md", "_rundeps": [ "askpass", "assertthat", "base64enc", "bslib", "cachem", "cli", "cpp11", "crosstalk", "curl", "data.table", "digest", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "fs", "generics", "ggplot2", "glue", "gtable", "highr", "htmltools", "htmlwidgets", "httr", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "later", "lazyeval", "lifecycle", "magrittr", "memoise", "mime", "openssl", "otel", "pillar", "pkgconfig", "plotly", "promises", "purrr", "R6", "rappdirs", "RColorBrewer", "Rcpp", "rlang", "rmarkdown", "S7", "sass", "scales", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "yaml" ], "_vignettes": [ { "source": "classification.Rmd", "filename": "classification.html", "title": "Standardised Classification of Effects Based on Their Uncertainty", "author": "Thierry Onkelinx", "engine": "knitr::rmarkdown", "headings": [ "A Simple, Stable and Transparent Classification of Effects", "A Detailed Classification", "Classification Using effectclass", "Suggestion for Displaying Effects in a Tabular Format" ], "created": "2020-01-04 11:32:28", "modified": "2023-10-27 13:30:12", "commits": 9 }, { "source": "visualisation.Rmd", "filename": "visualisation.html", "title": "Visualising Effects", "author": "Thierry Onkelinx", "engine": "knitr::rmarkdown", "headings": [ "stat_fan()", "stat_effect() and scale_effect()", "format_ci() and classification()", "References" ], "created": "2020-01-04 11:32:28", "modified": "2023-10-27 13:30:12", "commits": 9 } ], "_score": 5.661812685537262, "_indexed": true, "_nocasepkg": "effectclass", "_universes": [ "inbo", "thierryo" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.5", "date": "2026-06-01T09:30:17.000Z", "distro": "noble", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "0eca9c2958d00787d7c25701c33dba94e34b664e1a9a94954c514dd91b892714", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.6.0", "os": "linux", "version": "0.1.5", "date": "2026-06-01T09:30:00.000Z", "distro": "noble", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "6a530aedc7bbe1920caeb9247497aedb4ca971849a3e9283a67adef9f1b7edee", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.5.3", "os": "mac", "version": "0.1.5", "date": "2026-06-01T09:30:09.000Z", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "2be59fcd088dc2fb478a417dc919e7a5191722dc7e607ec6ffbbca1f2885b979", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.6.0", "os": "mac", "version": "0.1.5", "date": "2026-06-01T09:29:36.000Z", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "ddd8d2366fb3c52045d40380db90192ff65ee3cc0e770c7bf5b12c1afe1bb20d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.5", "date": "2026-06-01T09:30:33.000Z", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "d13aee3504c7990617056ee093b05d42758d10b3a4a252c058b5cb838ae0ef44", "status": "success", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.7.0", "os": "win", "version": "0.1.5", "date": "2026-06-01T09:30:39.000Z", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "d43faa761c3e50d6cf448cc5ccbb19bce7dedf4662898c29fb3d8daac767c0fc", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.5.3", "os": "win", "version": "0.1.5", "date": "2026-06-01T09:29:29.000Z", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "bede11925a3c492c225e40f05a772d5223041b72c97757cd73ce9ac507ed39fb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" }, { "r": "4.6.0", "os": "win", "version": "0.1.5", "date": "2026-06-01T09:29:15.000Z", "commit": "a7aa52cd9b37eac733c48113f35438ed51e2dbff", "fileid": "0068246eea231bcd421b2b5c27226a498d9c2c5efddca605cb1120b5a6c72ba3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/inbo/actions/runs/26746418111" } ] }