kableExtra - Construct Complex Table with 'kable' and Pipe Syntax
Build complex HTML or 'LaTeX' tables using 'kable()' from 'knitr' and the piping syntax from 'magrittr'. Function 'kable()' is a light weight table generator coming from 'knitr'. This package simplifies the way to manipulate the HTML or 'LaTeX' codes generated by 'kable()' and allows users to construct complex tables and customize styles using a readable syntax.
Last updated 1 years ago
7.59 score 58 dependencies 154 dependentsqgisprocess - Use 'QGIS' Processing Algorithms
Provides seamless access to the 'QGIS' (<https://qgis.org/en/site/>) processing toolbox using the standalone 'qgis_process' command-line utility. Both native and third-party (plugin) processing providers are supported. Beside referring data sources from file, also common objects from 'sf', 'terra' and 'stars' are supported. The native processing algorithms are documented by QGIS.org (2024) <https://docs.qgis.org/latest/en/docs/user_manual/processing_algs/>.
Last updated 1 days ago
197 stars 5.63 score 20 dependenciescodemetar - Generate 'CodeMeta' Metadata for R Packages
The 'Codemeta' Project defines a 'JSON-LD' format for describing software metadata, as detailed at <https://codemeta.github.io>. This package provides utilities to generate, parse, and modify 'codemeta.json' files automatically for R packages, as well as tools and examples for working with 'codemeta.json' 'JSON-LD' more generally.
Last updated 2 months ago
metadatacodemetaropenscicitationcreditlinked-datajson-ldpeer-reviewed
66 stars 4.21 score 41 dependencies 5 dependentszen4R - Interface to 'Zenodo' REST API
Provides an Interface to 'Zenodo' (<https://zenodo.org>) REST API, including management of depositions, attribution of DOIs by 'Zenodo' and upload and download of files.
Last updated 3 months ago
apidatacitedepositionsdepositsdoifairzenodo
44 stars 3.46 score 67 dependencies 2 dependentsfrictionless - Read and Write Frictionless Data Packages
Read and write Frictionless Data Packages. A 'Data Package' (<https://specs.frictionlessdata.io/data-package/>) is a simple container format and standard to describe and package a collection of (tabular) data. It is typically used to publish FAIR (<https://www.go-fair.org/fair-principles/>) and open datasets.
Last updated 9 days ago
frictionlessdataoscibio
27 stars 3.36 score 36 dependencies 4 dependentschecklist - A Thorough and Strict Set of Checks for R Packages and Source Code
An opinionated set of rules for R packages and R source code projects.
Last updated 2 months ago
checklistcontinuous-integrationcontinuous-testingquality-assurance
16 stars 2.22 score 113 dependencies 2 dependentscamtrapdp - Read and Manipulate Camera Trap Data Packages
Read and manipulate Camera Trap Data Packages ('Camtrap DP'). 'Camtrap DP' (<https://camtrap-dp.tdwg.org>) is a data exchange format for camera trap data. With 'camtrapdp' you can read, filter and transform data (including to Darwin Core) before further analysis in e.g. 'camtraptor' or 'camtrapR'.
Last updated 2 days ago
camtrap-dposcibio
5 stars 2.19 score 64 dependencies![](https://github.com/inbo/camtraptor/raw/HEAD/man/figures/logo.png)
camtraptor - Read, Explore and Visualize Camera Trap Data Packages
Read, explore and visualize Camera Trap Data Packages (Camtrap DP). 'Camtrap DP' (<https://camtrap-dp.tdwg.org>) is a community developed data exchange format for this type of data. With camtraptor you can read and filter data, create overviews of observed species, relative abundance or effort, and plot these data on a map.
Last updated 5 months ago
camera-trapsoscibio
10 stars 2.00 score 86 dependenciesinborutils - Collection of Useful R Utilities
While working on research projects, typical small functionalities are useful across these projects. Instead of copy-pasting these functions in all individual project repositories/folders, this package collects these functions for reuse by ourself and - if useful - others as well.
Last updated 10 months ago
10 stars 1.95 score 110 dependencies![](https://github.com/trias-project/trias/raw/HEAD/man/figures/logo.png)
trias - Process Data for the Project Tracking Invasive Alien Species (TrIAS)
This package provides functionality to facilitate the data processing for the project Tracking Invasive Alien Species (TrIAS <http://trias-project.be>).
Last updated 2 months ago
invasive-speciesoscibio
3 stars 1.75 score 121 dependenciesINBOmd - Markdown Templates for INBO
Several templates to generate reports, presentations and posters.
Last updated 8 months ago
bookdownrmarkdownxelatex
11 stars 1.64 score 121 dependencies![](https://github.com/rOpenSci/wateRinfo/raw/HEAD/man/figures/logo.png)
wateRinfo - Download Time Series Data from Waterinfo.be
wateRinfo facilitates access to waterinfo.be (<https://www.waterinfo.be>), a website managed by the Flanders Environment Agency (VMM) and Flanders Hydraulics Research. The website provides access to real-time water and weather related environmental variables for Flanders (Belgium), such as rainfall, air pressure, discharge, and water level. The package provides functions to search for stations and variables, and download time series.
Last updated 2 years ago
apiclimatelifewatchopen-scienceoscibioropensciwaterweather
13 stars 1.58 score 26 dependenciesinbodb - Connect to and Retrieve Data from Databases on the INBO Server
A bundle of functions to connect to and retrieve data from databases on the INBO server, with dedicated functions to query some of these databases.
Last updated 17 days ago
database
1.24 score 24 dependencies 1 dependentsn2khab - Providing Preprocessed Reference Data for Flemish Natura 2000 Habitat Analyses
The n2khab package is an R package with preprocessing functions and standard reference data, useful for analyses regarding Flemish Natura 2000 habitats and regionally important biotopes (RIBs).
Last updated 9 months ago
habitatnatura2000preprocessing-functionsreproducibility
2 stars 1.24 score 42 dependencies 1 dependentseffectclass - Classification and Visualisation of Effects
Classify effects by comparing the confidence intervals with thresholds.
Last updated 3 months ago
effect-sizefan-chart
6 stars 1.16 score 71 dependenciesprotocolhelper - Helper Functions to Manage Protocols
Helper functions to manage INBO protocols.
Last updated 3 days ago
5 stars 1.08 score 121 dependenciesinbospatial - A Collection of Useful R Functions for Spatial Data
Useful R functions developed at the Research Institute for Nature and Forest (INBO) for dealing with spatial raster or vector data.
Last updated 1 years ago
4 stars 0.82 score 49 dependenciesmultimput - Using Multiple Imputation to Address Missing Data
Accompanying package for the paper: Working with population totals in the presence of missing data comparing imputation methods in terms of bias and precision. Published in 2017 in the Journal of Ornithology volume 158 page 603–615 (<doi:10.1007/s10336-016-1404-9>).
Last updated 12 months ago
imputationimputation-model
1 stars 0.71 score 34 dependencies 1 dependentsLSVI - Rekenmodule Lokale Staat Van Instandhouding van habitattypen
Het package LSVI bundelt een aantal functies in verband met het ophalen van informatie over en het berekenen van de Lokale Staat Van Instandhouding (LSVI) van habitattypes.
Last updated 1 years ago
1 stars 0.71 score 107 dependenciesn2kanalysis - Generic Functions to Analyse Data from the 'Natura 2000' Monitoring
All generic functions and classes for the analysis for the 'Natura 2000' monitoring. The classes contain all required data and definitions to fit the model without the need to access other sources. Potentially they might need access to one or more parent objects. An aggregation object might for example need the result of an imputation object. The actual definition of the analysis, using these generic function and classes, is defined in dedictated analysis R packages for every monitoring scheme. For example 'abvanalysis' and 'watervogelanalysis'.
Last updated 7 months ago
analysismonitoringnatura2000
1 stars 0.61 score 62 dependencieswatina - Querying and Processing Data from the INBO Watina Database
The R-package watina contains functions to query and process data from the Watina database at the Research Institute for Nature and Forest (INBO). This database primarily provides groundwater level and chemical data, mainly from natural areas in Flanders (Belgium).
Last updated 10 months ago
groundwaterpreprocessing-functionsreproducibility
1 stars 0.61 score 32 dependenciesinlatools - Diagnostic Tools for INLA Models
Several functions which can be useful to choose sensible priors and diagnose the fitted model.
Last updated 2 years ago
bayesian-statisticsgplv3inlamixed-modelsmodel-checkingmodel-validation
4 stars 0.61 score 52 dependenciesINBOtheme - Themes for ggplot2
Several themes for the ggplot2 package. Among others themes complying with the style guide for the Research Institute for Nature and Forest (INBO) and Elsevier journals.
Last updated 1 years ago
ggplot2ggplot2-themes
3 stars 0.49 score 33 dependenciesn2khelper - Auxiliary Functions for the Analysis and Reporting of the Natura 2000 Monitoring
Auxiliary functions for analysing Natura 2000 monitoring data.
Last updated 2 years ago
natura2000
0.49 score 36 dependencies 1 dependents![](https://github.com/inbo/dhcurve/raw/HEAD/man/figures/logo.png)
dhcurve - Automated Modelling of Diameter Height Curves for Trees
Model diameter height curves for individual tree species and forests.
Last updated 1 years ago
analysisforestry
0.23 score 74 dependenciesterritoria - Clustering Observations from Breeding Birds into Territoria
Clusters individual observations based on breeding indication and distance between observations.
Last updated 1 years ago
birdbreedingclusterhome-rangeterritory
0.09 score 27 dependenciesgrtsdb - Create a Sampling Frame Using GRTS
Create an SQLite database containing the sampling framework for different levels of resolution. Take a sample from this framework.
Last updated 3 years ago
grtssamplingsampling-methodssqlite
1 stars 0.09 score 17 dependencies![](https://github.com/inbo/ladybird/raw/HEAD/man/figures/logo.png)
ladybird - Analysis of Ladybird Occurrence Data
Analysis of ladybird occurrence data from Belgium, the Netherlands and the UK since 1990.
Last updated 3 years ago
0.00 score 97 dependencieslipsum - Generate dummy text
Functions that generate dummy text. This is useful when developping a corporate identity for documents.
Last updated 6 years ago
lipsumtypography
0.00 score 0 dependencies